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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CA10, Carbonic anhydrase X
Sequence ID:NM_001082533
NM_020178
NM_001082534
Entrez Gene ID:56934
Ensembl ID:ENSG00000154975

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q21.33Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 49708944 - 50235146

 Exon Info From UCSC:
NM_001082533
NM_020178
NM_001082534

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4181377Full LengthBC020577carbonic anhydrase X
5260321Full LengthBC068462carbonic anhydrase X
5276935Full LengthBC047456carbonic anhydrase X
5178196IncompleteBC029865carbonic anhydrase X

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_064563  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001082533 NP_001076002    
NM_001082534 NP_001076003    
NM_020178 NP_064563 Q9NS85 Carb_anhydrase

Related Sequences

 
mRNAGenPeptSwissProt
BC020577 AAH20577 Q9NS85
BC029865 AAH29865 A0PJH9
BC047456 AAH47456 Q9NS85
BC068462 AAH68462 Q9NS85
AF288385 AAK11974 Q9NS85
AY358509 AAQ88873 Q9NS85
JF432658 ADZ15875  
AB036836 BAB00615 Q9NS85
AB001597 BAB46928 Q9NS85
AK313001 BAG35837 Q9NS85
AK294652 BAG57827 B4DGL6
AL161812 CAB82105 Q9NS85
CR749607 CAH18402 Q68D28

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CA10 NP_001076002 M.musculus Car10 72605 Gene Info NP_082572 100
R.norvegicus LOC100360015 100360015   XP_002727818 100
A.gambiae AgaP_AGAP000688 1272280   XP_311219 46
D.melanogaster CG32698 31915   NP_572581 44
C.elegans cah-2 174218   NP_495567 39
C.elegans cah-1 186231   NP_498083 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)