Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ANKRD40, ankyrin repeat domain 40
Sequence ID:NM_052855
Entrez Gene ID:91369
Ensembl ID:ENSG00000154945

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q21.33Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 48770556 - 48772225

NM_052855 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
229544877055148773503
295531364877430048774481
313736314877675948777253
363237804877792848778076
378141694878488148785269

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3834331Full LengthBC012978ankyrin repeat domain 40
2988205IncompleteBC005853ankyrin repeat domain 40

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_443087  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_052855 NP_443087 Q6AI12 Ank

Related Sequences

 
mRNAGenPeptSwissProt
BC012978 AAH12978 Q6AI12
EU164539 ABW05020 A8IK34
HQ448202 ADQ32683  
AK314010 BAG36721 A8IK34
CR627413 CAH10502 Q6AI12

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ANKRD40 NP_443087 M.musculus Ankrd40 71452 Gene Info NP_082075 93
R.norvegicus Ankrd40 690586   NP_001128171 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)