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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CDC27, Cell division cycle 27 homolog (S. cerevisiae)
Sequence ID:NM_001114091
NM_001256
Entrez Gene ID:996
Ensembl ID:ENSG00000004897

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q21.32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 45198137 - 45266617

 Exon Info From UCSC:
NM_001114091
NM_001256

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4301175Full LengthBC011656cell division cycle 27 homolog (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001247  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001114091 NP_001107563    
NM_001256 NP_001247 P30260 TPR_1
TPR_2

Related Sequences

 
mRNAGenPeptSwissProt
U00001 AAA60471 P30260
S78234 AAB34378 P30260
BC011656 AAH11656 P30260
DQ892780 ABM83706  
DQ896027 ABM87026  
AK296881 BAG59442 B4DL80
AK299342 BAG61343 B4DRN1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CDC27 NP_001247 R.norvegicus Cdc27 360643   NP_001019964 98
M.musculus Cdc27 217232 Gene Info NP_663411 97
A.gambiae AgaP_AGAP007690 1269539   XP_308181 47
D.melanogaster Cdc27 38798   NP_648093 45
S.pombe nuc2 2542438   NP_594604 39
A.thaliana HBT 816519   NP_849994 36
N.crassa NCU00213 3872745   XP_956598 34
C.elegans mat-1 172145   NP_001021714 31
S.cerevisiae CDC27 852194   NP_009469 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)