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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GPATCH8, G patch domain containing 8
Sequence ID:NM_001002909
NR_036474
Entrez Gene ID:23131
Ensembl ID:ENSG00000186566

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q21.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 42472651 - 42543303

NM_001002909 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1961944247264542478820
619563254248328842483418
632664694250171642501859
647065564251243242512518
655766244251384542513912
662566974254183942541911
669867724255219642552270
677370364258069342580956

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9020619Full LengthBC136629G patch domain containing 8
3833127IncompleteBC024147G patch domain containing 8
4658461IncompleteBC017808KIAA0553
4777945IncompleteBC063601KIAA0553

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001002909  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001002909 NP_001002909 Q9UKJ3 G-patch

Related Sequences

 
mRNAGenPeptSwissProt
BC024147 AAH24147 Q9UKJ3
BC136629 AAI36630 Q9UKJ3
AB011125 BAA25479 Q9UKJ3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GPATCH8 NP_001002909 M.musculus Gpatch8 237943 Gene Info NP_001152964 91
R.norvegicus LOC685233 685233   XP_001062937 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)