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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ATP6V0A1, ATPase, H+ transporting, lysosomal V0 subunit a1
Sequence ID:NM_001130020
NM_001130021
NM_005177
Entrez Gene ID:535
Ensembl ID:ENSG00000033627

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, brain, cartilage, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 40661801 - 40663534

 Exon Info From UCSC:
NM_001130020
NM_001130021
NM_005177

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5195776Full LengthBC032398ATPase, H+ transporting, lysosomal V0 subunit a1
4615963IncompleteBC017826ATPase, H+ transporting, lysosomal V0 subunit a1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005168  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001130020 NP_001123492    
NM_001130021 NP_001123493 Q93050  
NM_005177 NP_005168   V_ATPase_I

Related Sequences

 
mRNAGenPeptSwissProt
U18920 AAA69700 Q13058
BC032398 AAH32398 Q93050
L78933 AAL77442 Q53X12
AK223554 BAD97274 Q53ET5
AK294512 BAH11795 B7Z2A9
AK294789 BAH11885 B7Z2J9
AK295682 BAH12153 Q93050
AK299784 BAH13127 B7Z641
AK316305 BAH14676 Q93050
Z71460 CAA96077 Q93050
Q53X12
AL137683 CAB70874 Q93050
CR627443 CAH10528 Q6AHY6
BX648978 CAI56709 Q5CZH6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ATP6V0A1 NP_001123493 R.norvegicus Atp6v0a1 29757   NP_113792 96
M.musculus Atp6v0a1 11975 Gene Info NP_058616 96
A.gambiae AgaP_AGAP003711 1274390   XP_562586 65
D.melanogaster Vha100-1 43442   NP_001163768 63
C.elegans unc-32 176257   NP_001023017 61
S.cerevisiae VPH1 854444   NP_014913 44
A.thaliana VHA-A1 817400   NP_850122 44
N.crassa NCU03463 3872192   XP_956054 43
S.pombe vph1 2542310   NP_594219 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)