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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RERE, arginine-glutamic acid dipeptide (RE) repeats
Sequence ID:NM_001042681
NM_001042682
NM_012102
Entrez Gene ID:473
Ensembl ID:ENSG00000142599

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p36.23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 8412465 - 8716316

 Exon Info From UCSC:
NM_001042681
NM_001042682
NM_012102

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100068247Full LengthBC167857arginine-glutamic acid dipeptide (RE) repeats

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036234  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001042681 NP_001036146    
NM_001042682 NP_001036147    
NM_012102 NP_036234 Q9P2R6 Myb_DNA-binding
GATA
BAH
ELM2
Atrophin-1

Related Sequences

 
mRNAGenPeptSwissProt
AF016005 AAC31120 Q9P2R6
AF118275 AAD27584 Q9P2R6
BC167857 AAI67857  
AB007927 BAA32303 Q9P2R6
AB036737 BAA95898 Q9P2R6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RERE NP_001036146 M.musculus Rere 68703 Gene Info NP_001078961 95
R.norvegicus Rere 116665   NP_446337 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)