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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. FKBP10, FK506 binding protein 10, 65 kDa
Sequence ID:NM_021939
RefSeqGene ID:NG_015860
Entrez Gene ID:60681
Ensembl ID:ENSG00000141756

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal medulla, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
MACULAR DEGENERATION, AGE-RELATED, 4CFH

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q21.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 39969200 - 39979469

NM_021939 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
15703996896139969530
5717163997330939973454
7179063997434039974529
90710523997463339974778
105312423997546139975650
124313883997578139975926
138915813997652039976712
158217243997719839977340
172518883997790539978068
188928833997847439979468

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4154344Full LengthBC016467FK506 binding protein 10, 65 kDa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_068758  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_021939 NP_068758 Q96AY3 EC 5.2.1.8 efhand
FKBP_C

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC016467 AAH16467 Q96AY3 EC 5.2.1.8
AF337909 AAM15770 Q96AY3 EC 5.2.1.8
DQ894994 ABM85920    
EU832041 ACE86703    
EU831946 ACE87387    
AK025694 BAB15220 Q96AY3 EC 5.2.1.8
AK025874 BAB15266 Q9H6J3  
AB045981 BAB20974 Q96AY3 EC 5.2.1.8
AK092708 BAC03954 Q8NAG5  
AK172811 BAD18781 Q6ZME7  
AK296107 BAG58857 B4DJJ5  
BX537452 CAD97695 Q96AY3 EC 5.2.1.8
AL832985 CAH56332 Q658U4  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens FKBP10 NP_068758 R.norvegicus Fkbp10 360627   NP_001014142 89
M.musculus Fkbp10 14230 Gene Info NP_034351 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)