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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. IGFBP4, insulin-like growth factor binding protein 4
Sequence ID:NM_001552
Entrez Gene ID:3487
Ensembl ID:ENSG00000141753

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q12-q21.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 38599701 - 38613102

NM_001552 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
16613859967538600335
6628193860923638609393
8209543861017938610313
95522353861270038613980

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4661581Full LengthBC016041insulin-like growth factor binding protein 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001543  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001552 NP_001543 P22692 Thyroglobulin_1
IGFBP

Related Sequences

 
mRNAGenPeptSwissProt
M62403 AAB06189 P22692
BC016041 AAH16041 P22692
BT019891 AAV38694 P22692
BT019892 AAV38695 P22692
AK290810 BAF83499  
AK304572 BAG65363 B4E351

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens IGFBP4 NP_001543 M.musculus Igfbp4 16010 Gene Info NP_034647 92
R.norvegicus Igfbp4 360622   NP_001004274 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta