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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NHLH2, nescient helix loop helix 2
Sequence ID:NM_001111061
NM_005599
Entrez Gene ID:4808
Ensembl ID:ENSG00000177551

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p12-p11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 116380346 - 116383324

 Exon Info From UCSC:
NM_001111061
NM_005599

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40010648Full LengthBC096359nescient helix loop helix 2
40010649Full LengthBC096360nescient helix loop helix 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005590  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001111061 NP_001104531    
NM_005599 NP_005590 Q02577 HLH

Related Sequences

 
mRNAGenPeptSwissProt
BC096359 AAH96359 Q02577
BC096360 AAH96360 Q02577
AK312849 BAG35702 B2R755

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NHLH2 NP_001104531 M.musculus Nhlh2 18072 Gene Info NP_848892 98
R.norvegicus Nhlh2 295327   NP_001099927 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)