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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. COPRS, coordinator of PRMT5, differentiation stimulator
Sequence ID:NM_018405
Entrez Gene ID:55352
Ensembl ID:ENSG00000172301

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 30179157 - 30186218

NM_018405 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
224643017888430179326
4656833017983030180048
6847503018381730183883
7519573018611930186325

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3882737Full LengthBC012386chromosome 17 open reading frame 79

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018405 NP_060875 Q9NQ92  

Related Sequences

 
mRNAGenPeptSwissProt
BC012386 AAH12386 Q9NQ92
AF407672 AAK97661 Q9NQ92
AJ272196 CAB77267 Q9NQ92

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens C17orf79 NP_060875 M.musculus 2410022L05Rik 66423 Gene Info NP_079832 77
R.norvegicus RGD1565675 290925   NP_001162592 75

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)