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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GOSR1, Golgi SNAP receptor complex member 1
Sequence ID:NM_001007024
NM_004871
NM_001007025
Entrez Gene ID:9527
Ensembl ID:ENSG00000108587

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 28804440 - 28849613

 Exon Info From UCSC:
NM_001007024
NM_004871
NM_001007025

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4250494Full LengthBC012620golgi SNAP receptor complex member 1
4697067Full LengthBC040471golgi SNAP receptor complex member 1
5001859IncompleteBC040072golgi SNAP receptor complex member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001007026  NP_001007025  NP_004862  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001007024 NP_001007025   V-SNARE
NM_001007025 NP_001007026   V-SNARE
NM_004871 NP_004862 O95249 V-SNARE

Related Sequences

 
mRNAGenPeptSwissProt
AF047438 AAC39889 O95249
AF073926 AAD12945 O95249
BC012620 AAH12620 Q96QI9
BC040471 AAH40471 O95249
AK291381 BAF84070 A8K5R6
AK298714 BAG60870 B4DQA8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GOSR1 NP_004862 M.musculus Gosr1 53334 Gene Info NP_058090 98
R.norvegicus Gosr1 94189   NP_446036 98
A.gambiae AgaP_AGAP002454 1273508   XP_312491 51
D.melanogaster Gos28 248102   NP_650739 50
C.elegans gosr-1 176044   NP_498621 39
A.thaliana GOS12 819128   NP_182045 36
N.crassa NCU02706 3881629   XP_965479 32
S.cerevisiae GOS1 856354   NP_011832 28

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)