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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. NUFIP2, nuclear fragile X mental retardation protein interacting protein 2
Sequence ID:NM_020772
Entrez Gene ID:57532
Ensembl ID:ENSG00000108256

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 27588645 - 27621136

NM_020772 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1987732758285427591608
877488062759451527594547
8807105312761300927614733
10532108972762080027621165

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6502841Full LengthBC108307nuclear fragile X mental retardation protein interacting protein 2
40128910Full LengthBC129990nuclear fragile X mental retardation protein interacting protein 2

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_020772 NP_065823 Q7Z417  

Related Sequences

 
mRNAGenPeptSwissProt
BC108307 AAI08308 Q7Z417
BC129989 AAI29990 A1L3A6
BC129990 AAI29991 A1L3A7
AY232289 AAP69984 Q7Z417
AB037742 BAA92559 Q7Z417
AK293075 BAF85764 A1L3A7
AK297732 BAG60082 A1L3A6
AJ493465 CAD38278 Q7Z417

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NUFIP2 NP_065823 M.musculus Nufip2 68564 Gene Info NP_001019376 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)