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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PIGS, phosphatidylinositol glycan anchor biosynthesis, class S
Sequence ID:NM_033198
Entrez Gene ID:94005
Ensembl ID:ENSG00000087111

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17p13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 26881237 - 26898514

 Exon Info From UCSC:
NM_033198

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3944034Full LengthBC069228phosphatidylinositol glycan anchor biosynthesis, class S
3351792IncompleteBC007301phosphatidylinositol glycan anchor biosynthesis, class S
3455804IncompleteBC001319phosphatidylinositol glycan anchor biosynthesis, class S

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_033198 NP_149975 Q96S52  

Related Sequences

 
mRNAGenPeptSwissProt
AF161427 AAF28987 Q9P073
BC001319 AAH01319 Q9BVC1
BC007301 AAH07301 Q96IR5
BC069228 AAH69228 Q96S52
AY359112 AAQ89470 Q96S52
AB057723 BAB60853 Q96S52
AK055512 BAB70938 Q96NG1
AK075428 BAC11615 Q8NBL9
AK314583 BAG37159 B2RBB2
AK127162 BAG54444 B3KXD2
AK297046 BAG59572 B4DLL0
BX640839 CAE45912 Q6MZW5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PIGS NP_149975 M.musculus Pigs 276846 Gene Info NP_958808 92
R.norvegicus Pigs 303277   NP_001006602 91
A.gambiae AgaP_AGAP002933 1273029   XP_311969 36
D.melanogaster CG31120 42979   NP_733060 31
S.pombe gpi17 2542284   NP_594335 31
A.thaliana AT3G07180 819905   NP_187374 28

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)