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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. USP22, Ubiquitin specific peptidase 22
Sequence ID:NM_015276
Entrez Gene ID:23326
Ensembl ID:ENSG00000124422

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17p11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 20902909 - 20946352

 Exon Info From UCSC:
NM_015276

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40027759Full LengthBC126898ubiquitin specific peptidase 22
3344941IncompleteBC050994ubiquitin specific peptidase 22
3613419IncompleteBC007196ubiquitin specific peptidase 22
3629270IncompleteBC013364ubiquitin specific peptidase 22
3632384IncompleteBC025317ubiquitin specific peptidase 22
40027756IncompleteBC110499ubiquitin specific peptidase 22

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_015276 NP_056091 Q9UPT9 EC 3.4.19.12  

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC007196 AAH07196 Q9UPT9 EC 3.4.19.12
BC025317 AAH25317 Q9UPT9 EC 3.4.19.12
BC110499 AAI10500 Q9UPT9 EC 3.4.19.12
BC126898 AAI26899 Q9UPT9 EC 3.4.19.12
AB028986 BAA83015 Q9UPT9 EC 3.4.19.12
BX640815 CAE45893 Q9UPT9 EC 3.4.19.12

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens USP22 NP_056091 M.musculus Usp22 216825 Gene Info NP_001004143 98
R.norvegicus Usp22 303201   XP_220534 98
D.melanogaster not 40030   NP_524140 58
A.gambiae AgaP_AGAP012119 1280557   XP_320409 57
S.cerevisiae UBP8 855263   NP_013950 38
S.pombe ubp8 2542135   NP_592992 38
N.crassa NCU02375 3875927   XP_959796 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)