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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. B9D1, B9 protein domain 1
Sequence ID:NM_001243473
NM_001243475
NM_015681
RefSeqGene ID:NG_031885
Entrez Gene ID:27077
Ensembl ID:ENSG00000108641

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17p11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 19246488 - 19266026

Transcript StartTranscript EndChromosomal Start Chromosomal End
62961924648319246773
2973641924710219247169
3654271925058119250643
4285241925109619251192
5256361926115219261263
6377051926363219263700
7069321926581919266045

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3953287Full LengthBC002944B9 protein domain 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_056496  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001243473 NP_001230402    
NM_001243475 NP_001230404    
NM_015681 NP_056496 Q9UPM9 B9

Related Sequences

 
mRNAGenPeptSwissProt
BC002944 AAH02944 Q9UPM9
AB030506 BAA82655 Q9UPM9
AK293815 BAG57221 B4DEW0
AK297782 BAG60126 B4DN64

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens B9D1 NP_056496 R.norvegicus B9d1 287383   NP_001099256 96
M.musculus B9d1 27078 Gene Info NP_038745 95
A.gambiae AgaP_AGAP006071 4576203   XP_001237757 38
D.melanogaster CG14870 41888   NP_650470 36
C.elegans tza-2 186954   NP_508203 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)