Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ALKBH5, alkB, alkylation repair homolog 5 (E. coli)
Sequence ID:NM_017758
Entrez Gene ID:54890
Ensembl ID:ENSG00000091542

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17p11.2|17p11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 18110138 - 18113260

NM_017758 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
114611808686618088326
146215421809826818098348
154316981811012818110283
169934311811153218113264

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6339184Full LengthBC062339alkB, alkylation repair homolog 5 (E. coli)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_017758 NP_060228 Q6P6C2  

Related Sequences

 
mRNAGenPeptSwissProt
BC062339 AAH62339 Q6P6C2
AK000315 BAA91078 Q6P6C2
AK301107 BAG62706 Q6P6C2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ALKBH5 NP_060228 R.norvegicus Alkbh5 303193   XP_220525 98
M.musculus Alkbh5 268420 Gene Info NP_766531 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)