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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TOM1L2, Target of myb1-like 2 (chicken)
Sequence ID:NM_001082968
NM_001033551
Entrez Gene ID:146691
Ensembl ID:ENSG00000175662

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, brain, cartilage, cerebellum, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17p11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 17748214 - 17749391

 Exon Info From UCSC:
NM_001082968
NM_001033551

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5298847Full LengthBC051650target of myb1-like 2 (chicken)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001033551 NP_001028723    
NM_001082968 NP_001076437 Q6ZVM7  

Related Sequences

 
mRNAGenPeptSwissProt
BC051650 AAH51650 Q6ZVM7
AF467441 AAL78338 Q6ZVM7
AY358769 AAQ89129 Q6UWJ0
AK057308 BAB71421 Q6ZVM7
AK124331 BAC85834 Q6ZVM7
AK294846 BAH11903 B7Z2L7
AK295111 BAH11978 B7Z2U2
AK299872 BAH13157 B7Z671
AK301944 BAH13590 Q6ZVM7
AK303305 BAH13936 B7Z8F0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TOM1L2 NP_001076437 M.musculus Tom1l2 216810 Gene Info NP_694720 95
R.norvegicus Tom1l2 360537   NP_001101747 95
A.gambiae AgaP_AGAP006097 1276769   XP_316154 50
D.melanogaster CG3529 39093   NP_648315 48
S.pombe SPAC1F3.05 2541469   NP_593008 27

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)