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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SCIMP, SLP adaptor and CSK interacting membrane protein
Sequence ID:NM_207103
Entrez Gene ID:388325
Ensembl ID:ENSG00000161929

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17p13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 5116306 - 5138118

NM_207103 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
135051139005114249
35142451182195118292
42548851245815124644
48961251266275126750
61366651380295138082

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9052916Full LengthBC144395chromosome 17 open reading frame 87
40132612Full LengthBC127925chromosome 17 open reading frame 87
40146585Full LengthBC130554chromosome 17 open reading frame 87
40146587Full LengthBC130556chromosome 17 open reading frame 87

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001271842 NP_001258771    
NM_207103 NP_996986 Q6UWF3  

Related Sequences

 
mRNAGenPeptSwissProt
BC127925 AAI27926 Q6UWF3
BC130554 AAI30555 Q6UWF3
BC130556 AAI30557 Q6UWF3
BC144395 AAI44396 A6XGL4
AY358809 AAQ89169 Q6UWF3
DQ778084 ABI63348 A6XGL4
HQ258063 ADR82817  
HQ258597 ADR83350  
AK297035 BAG59563 Q6UWF3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SCIMP NP_996986 M.musculus A430084P05Rik 327957 Gene Info NP_001038991 68
R.norvegicus Scimp 691993   XP_001080739 64

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)