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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RPA1, replication protein A1, 70kDa
Sequence ID:NM_002945
Entrez Gene ID:6117
Ensembl ID:ENSG00000132383

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 1733344 - 1800550

 Exon Info From UCSC:
NM_002945

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3912837Full LengthBC018126replication protein A1, 70kDa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002936  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002945 NP_002936 P27694 tRNA_anti
Rep-A_N
Rep_fac-A_C

Related Sequences

 
mRNAGenPeptSwissProt
M63488 AAA36584 P27694
BC018126 AAH18126 P27694
AF167994 AAQ13598 Q7Z4G2
HQ258560 ADR83314  
AB209732 BAD92969 P27694
AK289704 BAF82393 P27694

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RPA1 NP_002936 R.norvegicus Rpa1 287524   NP_001041308 89
M.musculus Rpa1 68275 Gene Info NP_080929 86
A.gambiae AgaP_AGAP001421 1281755   XP_321709 45
D.melanogaster RpA-70 40972   NP_524274 45
A.thaliana AT4G19130 827651   NP_567576 40
N.crassa NCU03606 3877515   XP_961333 40
S.pombe ssb1 2541158   NP_595092 39
A.thaliana RPA70C 834576   NP_199353 38
S.cerevisiae RFA1 851266   NP_009404 33

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta