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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CFDP1, craniofacial development protein 1
Sequence ID:NM_006324
Entrez Gene ID:10428
Ensembl ID:ENSG00000153774

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:16q22.2-q22.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 75327614 - 75467359

NM_006324 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
43357532760875327939
3364947533892175339079
4956147542898775429106
6157427544572275445849
7439627544643275446651
96310807544847575448592
108112817546718675467386

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3449836Full LengthBC000991craniofacial development protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006315  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006324 NP_006315 Q9UEE9 BCNT

Related Sequences

 
mRNAGenPeptSwissProt
BC000991 AAH00991 Q9UEE9
BT009819 AAP88821 Q9UEE9
DQ890998 ABM81924  
EU176574 ABW03375  
D85939 BAA20069 Q9UEE9
D86549 BAA20070 Q9UEE9
AB009285 BAA31867 Q9UEE9
AK313948 BAG36666 B2R9W9
CR542111 CAG46908 Q9UEE9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CFDP1 NP_006315 R.norvegicus Cfdp1 292027   NP_955410 85
M.musculus Cfdp1 23837 Gene Info NP_035931 84
A.gambiae AgaP_AGAP005152 1274833   XP_314040 41
D.melanogaster Yeti 7354404   NP_001137537 38
S.cerevisiae SWC5 852532   NP_009790 32
N.crassa NCU06491 3873269   XP_957131 27

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)