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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. AP1G1, adaptor-related protein complex 1, gamma 1 subunit
Sequence ID:NM_001030007
NM_001128
Entrez Gene ID:164
Ensembl ID:ENSG00000166747

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:16q23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 71766660 - 71842681

 Exon Info From UCSC:
NM_001030007
NM_001128

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4158263Full LengthBC036283adaptor-related protein complex 1, gamma 1 subunit
3451138IncompleteBC003414adaptor-related protein complex 1, gamma 1 subunit
5263221IncompleteBC051747adaptor-related protein complex 1, gamma 1 subunit

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001025178  NP_001119  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001030007 NP_001025178   Adaptin_N
Alpha_adaptinC2
NM_001128 NP_001119 O43747 Adaptin_N
Alpha_adaptinC2

Related Sequences

 
mRNAGenPeptSwissProt
BC003414 AAH03414 Q9BTR5
BC036283 AAH36283 Q8IY97
EU832566 ACE86968  
EU832486 ACE87658  
AB015317 BAA33389 O43747
AK055122 BAG51473 B3KNW1
AK128078 BAG54627 B3KXW5
AK293233 BAG56772 B4DDL1
AK294546 BAG57752 B4DGE1
AK299630 BAG61558 B4DS96
Y12226 CAA72902 O43747
AL110198 CAB53673 O43747

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens AP1G1 NP_001119 M.musculus Ap1g1 11765 Gene Info NP_033807 99
R.norvegicus Ap1g1 171494   NP_604455 99
A.gambiae AgaP_AGAP008251 1277731   XP_317218 57
D.melanogaster AP-1gamma 31842   NP_788890 57
C.elegans apg-1 173304   NP_740937 54
A.thaliana AT1G60070 842301   NP_176215 49
A.thaliana GAMMA-ADAPTIN 1 839001   NP_849701 49
N.crassa NCU04121 3877441   XP_961277 48
P.falciparum PF14_0529 812111   XP_001348703 43
S.pombe apl4 2539311   NP_588559 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)