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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PDPR, pyruvate dehydrogenase phosphatase regulatory subunit
Sequence ID:NM_017990
Entrez Gene ID:55066
Ensembl ID:ENSG00000090857

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16q22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 70147528 - 70195184

 Exon Info From UCSC:
NM_017990

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9007476Full LengthBC150251pyruvate dehydrogenase phosphatase regulatory subunit
3952764IncompleteBC006246pyruvate dehydrogenase phosphatase regulatory subunit
4993188IncompleteBC032327pyruvate dehydrogenase phosphatase regulatory subunit

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_017990 NP_060460 Q8NCN5  

Related Sequences

 
mRNAGenPeptSwissProt
BC150251 AAI50252 Q8NCN5
AK000941 BAA91436 Q9NWE6
AB082521 BAC02699 Q8NCN5
AK292502 BAF85191 Q8NCN5
AK093391 BAG52703 B3KSE1
AK302987 BAG64127 B4DZL5
AK316384 BAH14755 B7ZAR9
CR627404 CAH10494 Q8NCN5
BX538153 CAH10555 Q8NCN5
BX537614 CAH10819 Q6AWD0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PDPR NP_060460 M.musculus Pdpr 319518 Gene Info NP_938050 92
R.norvegicus Pdpr 307852   NP_001100900 92
A.gambiae AgaP_AGAP004715 1278513   XP_318114 46
D.melanogaster CG3626 31377   NP_572162 45
C.elegans Y106G6H.5 172922   NP_492730 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)