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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SOGA1, Suppressor of glucose, autophagy associated 1
Sequence ID:NM_080627
NM_199181
Entrez Gene ID:140710
Ensembl ID:ENSG00000149639

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:20q11.23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 35410256 - 35412387

 Exon Info From UCSC:
NM_080627
NM_199181

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100015397BC148414chromosome 20 open reading frame 117

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_080627 NP_542194    
NM_199181 NP_954650    

Related Sequences

 
mRNAGenPeptSwissProt
BC113405 AAI13406 O94964
BC113433 AAI13434 O94964
BC148414 AAI48415  
AB020696 BAA74912 O94964
AK022023 BAB13954 O94964
AK126630 BAC86621 O94964
AK131491 BAG54771 B3KYA9
BK007092 DAA34786 F2FB34

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SOGA1 NP_542194 M.musculus 9830001H06Rik 320706 Gene Info NP_001158135 92
R.norvegicus LOC311578 311578   XP_230787 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)