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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ATF3, activating transcription factor 3
Sequence ID:NM_001030287
NM_001040619
NM_001206484
NM_001206486
NM_001206488
NM_001674
NM_001206485
NM_004024
RefSeqGene ID:NG_029871
Entrez Gene ID:467
Ensembl ID:ENSG00000162772

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1q32.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 212788363 - 212792550

 Exon Info From UCSC:
NM_001030287
NM_001040619
NM_001674

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4138076Full LengthBC006322activating transcription factor 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001665  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001030287 NP_001025458 P18847  
NM_001040619 NP_001035709    
NM_001206484 NP_001193413    
NM_001206486 NP_001193415    
NM_001206488 NP_001193417    
NM_001674 NP_001665 P18847 bZIP_2

Related Sequences

 
mRNAGenPeptSwissProt
L19871 AAA20506 P18847
BC006322 AAH06322 P18847
BT006996 AAP35642 P18847
AY313926 AAP93895 Q7Z567
AY313927 AAP93896 P18847
DQ892723 ABM83649  
DQ895972 ABM86898  
AB066566 BAB84092 P18847
AB078026 BAC00495 P18847
AB078027 BAC00496 P18847
AB078028 BAC05510 Q8NG55
AB209032 BAD92269 Q59GS7
AK312998 BAG35834 P18847
AK294296 BAG57579 Q7Z567
CR450334 CAG29330 P18847

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ATF3 NP_001025458 M.musculus Atf3 11910 Gene Info NP_031524 95
R.norvegicus Atf3 25389   NP_037044 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)