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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CACNA1H, calcium channel, voltage-dependent, T type, alpha 1H subunit
Sequence ID:NM_001005407
NM_021098
RefSeqGene ID:NG_012647
Entrez Gene ID:8912
Ensembl ID:ENSG00000196557

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 1203412 - 1271610

 Exon Info From UCSC:
NM_001005407
NM_021098

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001005407  NP_066921  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001005407 NP_001005407   Ion_trans
PKD_channel
NM_021098 NP_066921 O95180 Ion_trans

Related Sequences

 
mRNAGenPeptSwissProt
AF051946 AAC67239 O95180
AF073931 AAD17668 O95180
DQ363526 ABC88009 A2SX35
DQ363527 ABC88010 A2SX36
DQ363528 ABC88011 A2SX37
DQ363529 ABC88012 A2SX38
AK074965 BAG52041 B3KQH9
AJ420779 CAD12646 O95180

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CACNA1H NP_066921 M.musculus Cacna1h 58226 Gene Info NP_067390 86
R.norvegicus Cacna1h 114862   NP_722521 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)