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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SLC28A1, solute carrier family 28 (sodium-coupled nucleoside transporter), member 1
Sequence ID:NM_004213
NM_201651
Entrez Gene ID:9154
Ensembl ID:ENSG00000156222

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15q25.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 85427912 - 85488778

 Exon Info From UCSC:
NM_004213
NM_201651

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8991920Full LengthBC126204solute carrier family 28 (sodium-coupled nucleoside transporter), member 1
8991922Full LengthBC126206solute carrier family 28 (sodium-coupled nucleoside transporter), member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004204  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004213 NP_004204 O00337 Nucleos_tra2_N
Nucleos_tra2_C
Gate
NM_201651 NP_964014    

Related Sequences

 
mRNAGenPeptSwissProt
U62967 AAB53838 O00337
U62968 AAB53839 O00337
BC029788 AAH29788 O00337
BC039898 AAH39898 O00337
BC126204 AAI26205 O00337
BC126206 AAI26207 O00337
AF309632 AAL09447 Q96PL7
HQ258352 ADR83106  
AK291997 BAF84686 O00337
AK296074 BAH12251 B7Z3L5
AK296075 BAH12252 B7Z3L6
AK296119 BAH12260 B7Z3M4
AK298369 BAH12769 B7Z533

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC28A1 NP_004204 M.musculus Slc28a1 434203 Gene Info NP_001004184 84
R.norvegicus Slc28a1 116642   NP_446315 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)