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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. EFTUD1, elongation factor Tu GTP binding domain containing 1
Sequence ID:NM_001040610
NM_024580
Entrez Gene ID:79631
Ensembl ID:ENSG00000140598

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15q25.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 82422576 - 82530699

 Exon Info From UCSC:
NM_001040610
NM_024580

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100062273Full LengthBC156743elongation factor Tu GTP binding domain containing 1
5267393IncompleteBC040569elongation factor Tu GTP binding domain containing 1
100016131BC152910elongation factor Tu GTP binding domain containing 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_078856  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001040610 NP_001035700    
NM_024580 NP_078856 Q7Z2Z2 GTP_EFTU

Related Sequences

 
mRNAGenPeptSwissProt
BC152910 AAI52911 Q7Z2Z2
BC156743 AAI56744  
AK023181 BAB14450 Q7Z2Z2
AK056656 BAG51777 B3KPR5
AK300348 BAH13266 Q7Z2Z2
BX538332 CAD98101 Q7Z2Z2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens EFTUD1 NP_078856 M.musculus Eftud1 101592 Gene Info NP_780526 91
R.norvegicus Eftud1 308789   NP_001101004 91
A.gambiae AgaP_AGAP003001 1272951   XP_311881 51
D.melanogaster CG33158 39834   NP_788515 51
S.cerevisiae RIA1 855558   NP_014236 49
S.pombe SPCC553.08c 2539293   NP_587766 47
A.thaliana AT3G22980 821872   NP_188938 47
N.crassa NCU06278 3879021   XP_962882 46

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)