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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. IL16, interleukin 16
Sequence ID:NM_001172128
NM_004513
NM_172217
RefSeqGene ID:NG_029933
Entrez Gene ID:3603
Ensembl ID:ENSG00000172349

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15q26.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 81598434 - 81601139

 Exon Info From UCSC:
NM_001172128
NM_004513
NM_172217

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9020650Full LengthBC136660interleukin 16 (lymphocyte chemoattractant factor)
6043943IncompleteBC050362interleukin 16 (lymphocyte chemoattractant factor)
6067657IncompleteBC064911interleukin 16 (lymphocyte chemoattractant factor)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_757366  NP_004504  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001172128 NP_001165599    
NM_004513 NP_004504 Q14005 PDZ
NM_172217 NP_757366 Q14005 PDZ

Related Sequences

 
mRNAGenPeptSwissProt
S81601 AAB36371 Q14005
U82972 AAB58261 Q9UME6
AF053412 AAC12732 Q14005
M90391 AAD04636 Q14005
BC040272 AAH40272 Q8IUU6
BC050362 AAH50362 Q05BE6
BC136660 AAI36661 Q14005
AY324389 AAQ86961 Q14005
FJ032370 ACI00236 B5TY35
AK124565 BAC85888 I7GGY3
AK126222 BAC86494 Q6ZTT5
AK131530 BAD18668 Q14005
AK222512 BAD96232 Q53HR8
AK128740 BAG54724 B3KY62
AK303659 BAH14009 B7Z8M3
CR749286 CAH18141 Q68DS9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens IL16 NP_001165599 M.musculus Il16 16170 Gene Info NP_034681 82
R.norvegicus Il16 116996   NP_001099219 80

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta