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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PPCDC, phosphopantothenoylcysteine decarboxylase
Sequence ID:NM_021823
Entrez Gene ID:60490
Ensembl ID:ENSG00000138621

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15q24.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 75335626 - 75342079

NM_021823 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1417531592675315966
422487532058775320793
2493447533578175335876
3454737533672675336854
4746427534089375341061
64322187534149075343065

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4647763Full LengthBC014409phosphopantothenoylcysteine decarboxylase
3029247IncompleteBC005877phosphopantothenoylcysteine decarboxylase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_068595  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_021823 NP_068595 Q96CD2 EC 4.1.1.36 Flavoprotein

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF182419 AAG14955 Q96CD2 EC 4.1.1.36
BC014409 AAH14409 Q96CD2 EC 4.1.1.36
AY358848 AAQ89207 Q96CD2 EC 4.1.1.36
DQ892209 ABM83135    
DQ895405 ABM86331    
AK027491 BAB55151 Q96CD2 EC 4.1.1.36

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PPCDC NP_068595 R.norvegicus Ppcdc 363069   NP_001102233 88
M.musculus Ppcdc 66812 Gene Info NP_789801 87
A.gambiae AgaP_AGAP011994 1280676   XP_320537 64
D.melanogaster CG42496 8674001   NP_726105 57
C.elegans F25H9.6 179829   NP_506341 51
A.thaliana ATHAL3B 2745818   NP_973994 50
A.thaliana HAL3A 821327   NP_188430 50
N.crassa NCU04237 3877376   XP_961228 48
S.cerevisiae CAB3 853774   NP_012835 43
P.falciparum MAL8P1.81 2655432   XP_001349363 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)