Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PDGFRL, platelet-derived growth factor receptor-like
Sequence ID:NM_006207
RefSeqGene ID:NG_023332
Entrez Gene ID:5157
Ensembl ID:ENSG00000104213

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
COLON CANCERAKT1
APC
APC
AURKA
AXIN2
BCL10
BUB1B
CCND1
EP300
FGFR3
FLCN
MLH3
NRAS
ODC1
PIK3CA
PIK3CA
PLA2G2A
PTPRJ
SMAD7
TLR2
TLR4
TP53
TP53
HEPATOBLASTOMA, SOMATICAPC
APC
AXIN1
CASP8
CTNNB1
MET
PIK3CA
PIK3CA
TP53
TP53

Cytogenetic Location (from UniGene)

Cytogenetic Location:8p22-p21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 17433941 - 17500504

NM_006207 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13281743394117434268
3295001743464417434815
5017981744697617447273
7999501747855917478710
95112441748599517486288
124513841749158217491721
138519051750012117500641

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4278882Full LengthBC010927platelet-derived growth factor receptor-like

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006198  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006207 NP_006198 Q15198 ig

Related Sequences

 
mRNAGenPeptSwissProt
BC010927 AAH10927 Q15198
DQ892944 ABM83870  
DQ896192 ABM87191  
D37965 BAA07179 Q15198
AK289450 BAF82139 Q15198
CR541952 CAG46750 Q15198

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PDGFRL NP_006198 R.norvegicus Pdgfrl 290771   NP_001011921 90
M.musculus Pdgfrl 68797 Gene Info NP_081116 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)