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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. USP3, ubiquitin specific peptidase 3
Sequence ID:NM_001256702
NM_006537
NR_046341
NR_046342
Entrez Gene ID:9960
Ensembl ID:ENSG00000140455

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:15q22.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 63796851 - 63883660


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3916811Full LengthBC018113ubiquitin specific peptidase 3
6146202Full LengthBC065300ubiquitin specific peptidase 3
40025968Full LengthBC107137ubiquitin specific peptidase 3
40025969Full LengthBC107138ubiquitin specific peptidase 3
6023257IncompleteBC100029ubiquitin specific peptidase 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006528  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001256702 NP_001243631      
NM_006537 NP_006528 Q9Y6I4 EC 3.4.19.12 UCH
zf-UBP

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF077040 AAD27773 Q9Y2R8  
AF073344 AAD42992 Q9Y6I4 EC 3.4.19.12
BC018113 AAH18113 Q9Y6I4 EC 3.4.19.12
BC065300 AAH65300 Q9Y6I4 EC 3.4.19.12
BC100029 AAI00030 Q498Y2  
BC107137 AAI07138 Q9Y6I4 EC 3.4.19.12
BC107138 AAI07139 Q9Y6I4 EC 3.4.19.12
BT007269 AAP35933 Q9Y6I4 EC 3.4.19.12
AY461579 AAT37507 Q6JHV3  
DQ891025 ABM81951    
DQ894205 ABM85131    
AK022931 BAG51139 B3KMX7  
AK300948 BAG62577 B4DV65  
AK301236 BAG62807 B4DVU5  
AK301563 BAG63058 B4DWJ6  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens USP3 NP_006528 M.musculus Usp3 235441 Gene Info NP_659186 97
R.norvegicus Usp3 363084   NP_001020595 95
A.gambiae AgaP_AGAP008805 1275662   XP_314931 50
C.elegans Y71A12B.9 190579   NP_493434 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)