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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CCK, cholecystokinin
Sequence ID:NM_000729
NM_001174138
Entrez Gene ID:885
Ensembl ID:ENSG00000187094

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3p22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 42299397 - 42306255

 Exon Info From UCSC:
NM_000729
NM_001174138

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3639109Full LengthBC008283cholecystokinin
5199880Full LengthBC111026cholecystokinin
30722619Full LengthBC093055cholecystokinin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000720  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000729 NP_000720 Q6FG82
P06307
Gastrin
NM_001174138 NP_001167609    

Related Sequences

 
mRNAGenPeptSwissProt
BC008283 AAH08283 Q6FG82
P06307
BC093055 AAH93055 Q6FG82
P06307
BC111026 AAI11027 Q6FG82
BT006991 AAP35637 Q6FG82
P06307
DQ890568 ABM92185  
EU176479 ABW03280  
EU176482 ABW03283  
AK289716 BAF82405 Q6FG82
CR542226 CAG47022 Q6FG82
P06307

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CCK NP_001167609 M.musculus Cck 12424 Gene Info NP_112438 81
R.norvegicus Cck 25298   NP_036961 78

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)