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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. IFITM1, interferon induced transmembrane protein 1
Sequence ID:NM_003641
Entrez Gene ID:8519
Ensembl ID:ENSG00000185885

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11p15.5Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 314015 - 315187

NM_003641 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1366313990314355
367716314921315270

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3464598Full LengthBC000897interferon induced transmembrane protein 1 (9-27)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003632  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003641 NP_003632   CD225

Related Sequences

 
mRNAGenPeptSwissProt
J04164 AAA35494 P13164
BC000897 AAH00897 P13164
BT007173 AAP35837 P13164
DQ891094 ABM82020  
DQ894276 ABM85202  
AK290480 BAF83169 P13164
X84958 CAA59337 P13164

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens IFITM1 NP_003632 M.musculus Ifitm1 68713 Gene Info NP_001106186 66
R.norvegicus Ifitm1 293618   NP_001099784 66

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)