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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. DSE, dermatan sulfate epimerase
Sequence ID:NM_001080976
NM_013352
Entrez Gene ID:29940
Ensembl ID:ENSG00000111817

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6q22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 116599216 - 116599903

 Exon Info From UCSC:
NM_001080976
NM_013352

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5272885Full LengthBC039245dermatan sulfate epimerase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003300  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001080976 NP_001074445      
NM_003309 NP_003300 Q9H0U9   NAP
NM_013352 NP_037484 Q9UL01 EC 5.1.3.19  

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF042181 AAC62384 Q9H0U9  
AF098066 AAF00087 Q9UL01 EC 5.1.3.19
BC039245 AAH39245 Q9UL01 EC 5.1.3.19
BC048969 AAH48969 Q9H0U9  
DQ891261 ABM82187    
DQ894447 ABM85373    
AK128607 BAG54699 B3KY37  
AK298559 BAH12814 B7Z578  
AK301513 BAH13501 B7Z765  
AK316303 BAH14674 B7Z578  
AL136629 CAB66564 Q9H0U9  
CR533535 CAG38566 Q6FI91  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens DSE NP_037484 M.musculus Dse 212898 Gene Info NP_766096 94
R.norvegicus Dse 365583   NP_001102403 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)