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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. XCL2, chemokine (C motif) ligand 2
Sequence ID:NM_003175
Entrez Gene ID:6846
Ensembl ID:ENSG00000143185

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1q24.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 168510189 - 168513202

NM_003175 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
4357168510004168510357
358472168511230168511344
473566168513141168513234

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7262751Full LengthBC069360chemokine (C motif) ligand 2
30413788Full LengthBC070308chemokine (C motif) ligand 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003166  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003175 NP_003166 Q9UBD3 IL8

Related Sequences

 
mRNAGenPeptSwissProt
BC069360 AAH69360 Q9UBD3
BC070308 AAH70308 Q9UBD3

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)