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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PTGIR, prostaglandin I2 (prostacyclin) receptor (IP)
Sequence ID:NM_000960
Entrez Gene ID:5739
Ensembl ID:ENSG00000160013

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19q13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 47124536 - 47128342

NM_000960 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1912224712372547124928
122320024712671447127493
200321034712825347128353

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5223178Full LengthBC075814prostaglandin I2 (prostacyclin) receptor (IP)
5762329Full LengthBC110342prostaglandin I2 (prostacyclin) receptor (IP)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000951  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000960 NP_000951 P43119 7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
L29016 AAA36448 P43119
BC075814 AAH75814 P43119
BC110342 AAI10343 Q2YD89
AY242134 AAO92301 P43119
D25418 BAA05008 P43119
D29634 BAA06110 P43119
AK315278 BAG37688 B2RCU1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PTGIR NP_000951 M.musculus Ptgir 19222 Gene Info NP_032993 79
R.norvegicus Ptgir 292661   NP_001071112 79

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta