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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. LRR1, leucine rich repeat protein 1
Sequence ID:NM_152329
NM_203467
NR_037792
NR_037793
NM_203466
Entrez Gene ID:122769
Ensembl ID:ENSG00000165501

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:14q21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:14: 50065702 - 50081389

 Exon Info From UCSC:
NM_152329
NM_203467

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40148567Full LengthBC139921peptidylprolyl isomerase (cyclophilin)-like 5
100015875Full LengthBC148859peptidylprolyl isomerase (cyclophilin)-like 5
100015127BC146425peptidylprolyl isomerase (cyclophilin)-like 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_689542  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_152329 NP_689542 Q96L50 LRR_1
NM_203467 NP_982292    

Related Sequences

 
mRNAGenPeptSwissProt
BC030142 AAH30142 Q96L50
BC064133 AAH64133 Q6P393
BC093697 AAH93697 Q96L50
BC107888 AAI07889 Q32Q17
BC112241 AAI12242 Q96L50
BC139921 AAI39922 Q96L50
BC146425 AAI46426  
BC148859 AAI48860  
AY052405 AAL11430 Q96L50
DQ892269 ABM83195  
DQ895470 ABM86396  
AK293156 BAG56701 Q96L50
BX248298 CAD62625 Q96L50
BX648029 CAH10374 Q6AWA7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LRR1 NP_689542 M.musculus Lrr1 69706 Gene Info NP_001074875 79
R.norvegicus Lrr1 685860   NP_001102953 79
A.gambiae AgaP_AGAP003591 1274255   XP_313348 34
D.melanogaster Lrr47 34449   NP_523539 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)