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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. KATNA1, Katanin p60 (ATPase containing) subunit A 1
Sequence ID:NM_007044
NM_001204076
Entrez Gene ID:11104
Ensembl ID:ENSG00000186625

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6q25.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 149916171 - 149959728

Transcript StartTranscript EndChromosomal Start Chromosomal End
12210149916171149916369
211337149918198149918324
338472149918642149918776
473599149919359149919485
600758149922729149922887
759864149924403149924508
865986149925796149925917
9871167149944238149944418
11681325149953894149954051
13261532149959521149959727

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5764501Full LengthBC050428katanin p60 (ATPase-containing) subunit A 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_008975  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001204076 NP_001191005      
NM_007044 NP_008975 O75449 EC 3.6.4.3 AAA

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF056022 AAC25114 O75449 EC 3.6.4.3
BC050428 AAH50428 O75449 EC 3.6.4.3
AK292090 BAF84779 A8K7S5  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens KATNA1 NP_008975 M.musculus Katna1 23924 Gene Info NP_035965 93
R.norvegicus Katna1 292464   NP_001004217 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)