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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ELMOD2, ELMO/CED-12 domain containing 2
Sequence ID:NM_153702
RefSeqGene ID:NG_027825
Entrez Gene ID:255520
Ensembl ID:ENSG00000179387

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, brain, cartilage, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, pancreas, pancreatic islet, parathyroid, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
PULMONARY FIBROSIS, IDIOPATHICMUC5B
SFTPA1
SFTPA1
SFTPA2
SFTPC
TERC
TERT

Cytogenetic Location (from UniGene)

Cytogenetic Location:4q31.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 141445371 - 141449105

NM_153702 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1118141445316141445433
119269141446573141446723
270298141448619141448647
299396141456886141456983
397526141458565141458694
527660141461321141461454
661729141463727141463795
730863141464606141464739
8644404141471383141474923

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3897166Full LengthBC015168ELMO/CED-12 domain containing 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_714913  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_153702 NP_714913 Q8IZ81 ELMO_CED12

Related Sequences

 
mRNAGenPeptSwissProt
BC015168 AAH15168 Q8IZ81
AK312800 BAG35659 Q8IZ81

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ELMOD2 NP_714913 M.musculus Elmod2 244548 Gene Info NP_001164162 87
R.norvegicus Elmod2 688581   NP_001102976 86
A.gambiae AgaP_AGAP001450 1281724   XP_321676 46
D.melanogaster CG10068 40852   NP_649695 46
A.thaliana AT1G67400 843060   NP_564897 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)