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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HOXD12, homeobox D12
Sequence ID:NM_021193
Entrez Gene ID:3238
Ensembl ID:ENSG00000170178

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2q31.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 176964529 - 176965488

NM_021193 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1574176964529176965102
575813176965249176965487

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40120251Full LengthBC121103homeobox D12
40120253Full LengthBC121104homeobox D12

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_067016  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_021193 NP_067016 P35452 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
BC121103 AAI21104 Q0VAD8
BC121104 AAI21105 Q0VAD7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HOXD12 NP_067016 M.musculus Hoxd12 15432 Gene Info NP_032300 87
R.norvegicus Hoxd12 366082   XP_345374 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)