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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. RPSA, Ribosomal protein SA
Sequence ID:NM_002295
NM_001012321
Entrez Gene ID:3921
Ensembl ID:ENSG00000168028

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, adrenal medulla, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3p22.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 39449881 - 39450029

 Exon Info From UCSC:
NM_002295
NM_001012321

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3446816Full LengthBC013827ribosomal protein SA
3455545Full LengthBC034537ribosomal protein SA
3681016Full LengthBC107567ribosomal protein SA
3686924Full LengthBC062714ribosomal protein SA
3884457Full LengthBC071693ribosomal protein SA
3924066Full LengthBC073863ribosomal protein SA
3996864Full LengthBC070263ribosomal protein SA
3997019Full LengthBC005391ribosomal protein SA
4079845Full LengthBC010418ribosomal protein SA
4130936Full LengthBC008867ribosomal protein SA
4443949Full LengthBC050688ribosomal protein SA
4820432Full LengthBC066941ribosomal protein SA
5108337Full LengthBC053370ribosomal protein SA
5427114Full LengthBC068062ribosomal protein SA
5814758Full LengthBC071968ribosomal protein SA
6483856Full LengthBC071969ribosomal protein SA
6484091Full LengthBC071970ribosomal protein SA

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002286  NP_001012321  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001012321 NP_001012321 P08865 Ribosomal_S2
NM_002295 NP_002286 P08865 Ribosomal_S2

Related Sequences

 
mRNAGenPeptSwissProt
J03799 AAA36161 P08865
M14199 AAA36165 P08865
S37431 AAB22299 P08865
BC005391 AAH05391 P08865
BC008867 AAH08867 P08865
BC010418 AAH10418 P08865
BC013827 AAH13827 P08865
BC034537 AAH34537 P08865
BC050688 AAH50688 P08865
BC053370 AAH53370 P08865
BC062714 AAH62714 P08865
BC066941 AAH66941 P08865
BC068062 AAH68062 P08865
BC070263 AAH70263 P08865
BC071693 AAH71693 P08865
BC071968 AAH71968 P08865
BC071969 AAH71969 P08865
BC071970 AAH71970 P08865
BC073863 AAH73863 P08865
BC107567 AAI07568 P08865
AF503367 AAM33304 P08865
BT007219 AAP35883 P08865
DQ891146 ABM82072  
DQ894326 ABM85252  
X15005 CAA33112 P08865
X61156 CAA43469 P08865

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RPSA NP_001012321 R.norvegicus Rpsa 29236   NP_058834 99
M.musculus Rpsa 16785 Gene Info NP_035159 99
D.melanogaster sta 31106   NP_476750 65
A.gambiae RSSA_ANOGA 1280866   XP_320736 63
C.elegans rps-0 175628   NP_497978 60
A.thaliana P40 843569   NP_177381 57
A.thaliana RPSAb 819637   NP_187128 56
P.falciparum PF10_0264 810421   XP_001347548 53

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta