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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HBA1, hemoglobin, alpha 1
Sequence ID:NM_000558
RefSeqGene ID:NG_000006
Entrez Gene ID:3039
Ensembl ID:ENSG00000206172

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
HEINZ BODY ANEMIAHBA2
HBB
HEMOGLOBIN H DISEASE, NONDELETIONALHBA2
THALASSEMIA, ALPHA-HBA2
HBB

Cytogenetic Location (from UniGene)

Cytogenetic Location:16p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 222888 - 223668

NM_000558 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1132226678226809
133337226927227131
338576227281227519

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4047053Full LengthBC005931hemoglobin, alpha 1
4177243Full LengthBC008572hemoglobin, alpha 1
4849981Full LengthBC032122hemoglobin, alpha 1
5209215Full LengthBC050661hemoglobin, alpha 1
8069352Full LengthBC101846hemoglobin, alpha 1
8069354Full LengthBC101848hemoglobin, alpha 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000549  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000517 NP_000508 P69905 Globin
NM_000558 NP_000549 P69905 Globin

Related Sequences

 
mRNAGenPeptSwissProt
AF097635 AAC72839 P69905
AF105974 AAC97373 P69905
AF281258 AAF90195 Q9NQT3
BC005931 AAH05931 P69905
BC008572 AAH08572 P69905
BC032122 AAH32122 P69905
BC050661 AAH50661 P69905
BC101846 AAI01847 P69905
BC101848 AAI01849 P69905
AF349571 AAK37554 P69905
DQ891761 ABM82687  
DQ893109 ABM84035  
DQ894945 ABM85871  
DQ896383 ABM87382  
AK223392 BAD97112 P69905
V00493 CAA23752 P69905

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HBA1 NP_000549 H.sapiens HBA2 3040 Gene Info NP_000508 100
M.musculus Hba-a2 110257 Gene Info NP_001077424 87
M.musculus Hba-a1 15122 Gene Info NP_032244 87
R.norvegicus LOC360504 360504   NP_001007723 79
R.norvegicus Hba-a2 25632   NP_037228 78

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta