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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CKAP2, cytoskeleton associated protein 2
Sequence ID:NM_001098525
NM_018204
Entrez Gene ID:26586
Ensembl ID:ENSG00000136108

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebrum, cervix, colon, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:13q14Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 22764315 - 23237871

 Exon Info From UCSC:
NM_001098525
NM_018204

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9020319Full LengthBC136332cytoskeleton associated protein 2
40146327Full LengthBC130296cytoskeleton associated protein 2
6622858IncompleteBC105806cytoskeleton associated protein 2

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001098525 NP_001091995 Q8WWK9  
NM_001178126 NP_001171597    
NM_001256296 NP_001243225    
NM_018204 NP_060674    

Related Sequences

 
mRNAGenPeptSwissProt
L03632 AAA59007  
M12025 AAA59025  
L35918 AAA69777  
U07991 AAA87676  
U96394 AAB68783 Q96SB0
AF177227 AAG33675 Q8WWK9
BC010901 AAH10901 Q8WWK9
BC012159 AAH12159 Q6PJR7
BC030984 AAH30984 Q8NEJ1
BC093098 AAH93098 Q567P1
BC105806 AAI05807 Q8WWK9
BC130296 AAI30297 Q8WWK9
BC136332 AAI36333 B2RMQ4
AY062261 AAL47212 Q8WWK9
AY062262 AAL47213 Q8WWK9
EF560732 ABQ59042 Q8WWK9
EU832808 ACE87819  
GQ129239 ACT64373  
HQ258356 ADR83110  
AB001733 BAA19453  
AB001736 BAA19943  
AB014341 BAA28350  
AK001611 BAA91788 Q8WWK9
AK022982 BAB14345 Q8WWK9
AB064212 BAC01840  
AK299083 BAG61147 B4DR35
AB369252 BAH86638 C6KXN3
X57812 CAA40949  
X57817 CAA40954  
X57821 CAA40958  
AL136848 CAB66782 Q8WWK9
Y15758 CAC17466 Q8WWK9
AJ318021 CAC50882  
AJ318022 CAC51026  
AM181375 CAJ57425  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CKAP2 NP_060674 M.musculus Ckap2 80986 Gene Info NP_001004140 64
R.norvegicus Ckap2 306575   NP_001162610 63

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)