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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HTR3E, 5-hydroxytryptamine (serotonin) receptor 3E, ionotropic
Sequence ID:NM_001256613
NM_001256614
NM_182589
NM_198313
NM_198314
RefSeqGene ID:NG_012452
Entrez Gene ID:285242
Ensembl ID:ENSG00000186038

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3q27.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 183817966 - 183824780

Transcript StartTranscript EndChromosomal Start Chromosomal End
1473183817966183818438
474518183819272183819316
519628183821969183822078
629798183822574183822743
799959183823054183823214
9601164183823552183823756
11651380183823915183824130
13811911183824251183824781

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40017961Full LengthBC1011825-hydroxytryptamine (serotonin) receptor 3, family member E
40017962Full LengthBC1011835-hydroxytryptamine (serotonin) receptor 3, family member E
40017964Full LengthBC1011855-hydroxytryptamine (serotonin) receptor 3, family member E

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_872395  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001256613 NP_001243542 A5X5Y0  
NM_001256614 NP_001243543    
NM_182589 NP_872395   Neur_chan_LBD
Neur_chan_memb
NM_198313 NP_938055    
NM_198314 NP_938056    

Related Sequences

 
mRNAGenPeptSwissProt
BC101182 AAI01183 A5X5Y0
BC101183 AAI01184 A5X5Y0
BC101185 AAI01186 A5X5Y0
AY159813 AAO38167 A5X5Y0
AY349352 AAQ93476 A5X5Y0
AY349353 AAQ93477 A5X5Y0
DQ644022 ABG35128 A5X5Y0
EU165354 ABW05298 A8IKD7

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)