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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. RPS18, ribosomal protein S18
Sequence ID:NM_022551
Entrez Gene ID:6222
Ensembl ID:ENSG00000231500

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6p21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 33239852 - 33243767

NM_022551 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1483323985133239898
491473324040433240502
1482343324357333243659
2353363324374133243842
3374283324395233244043
4295423324416733244280

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4386992Full LengthBC106063ribosomal protein S18
8069292Full LengthBC101786ribosomal protein S18
8069294Full LengthBC101788ribosomal protein S18

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_022551 NP_072045 P62269 Ribosomal_S13

Related Sequences

 
mRNAGenPeptSwissProt
BC101786 AAI01787 P62269
BC101788 AAI01789 P62269
BC106063 AAI06064 P62269
AY536376 AAT66049 Q5GGW2
X69150 CAB56794 P62269

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RPS18 NP_072045 M.musculus Rps18 20084 Gene Info NP_035426 100
R.norvegicus LOC100360679 100360679   XP_002727879 100
R.norvegicus Rps18 294282   NP_998722 100
D.melanogaster RpS18 37292   NP_476964 78
A.gambiae AgaP_AGAP010375 1272669   XP_311570 77
C.elegans rps-18 178408   NP_502794 76
N.crassa NCU00475 3872941   XP_956794 76
A.thaliana RPS18C 826569   NP_192718 74
A.thaliana AT1G34030 840300   NP_564434 74
A.thaliana PFL 838884   NP_173692 74
S.pombe rps1801 2540180   NP_596506 74
S.pombe rps1802 3361064   NP_588057 74
S.cerevisiae RPS18A 852061   NP_010738 72
S.cerevisiae RPS18B 854982   NP_013686 72
P.falciparum PF11_0272 810819   XP_001347943 69

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)