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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. H3F3C, H3 histone, family 3C
Sequence ID:NM_001013699
Entrez Gene ID:440093
Ensembl ID:ENSG00000188375

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12p11.21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 31944118 - 31945175

NM_001013699 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1710713194412031945174

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5267388Full LengthBC066906histone H3-like

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001013721  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001013699 NP_001013721 Q6NXT2 Histone

Related Sequences

 
mRNAGenPeptSwissProt
BC066906 AAH66906 Q6NXT2
HQ873957 ADW85800 Q6NXT2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens H3F3C NP_001013721 A.gambiae AgaP_AGAP012197 1280489   XP_320335 96
A.gambiae AgaP_AGAP012196 1280490   XP_320336 96
R.norvegicus LOC100360868 100360868   XP_002729863 96
M.musculus H3f3c 625328 Gene Info XP_894986 95
A.thaliana AT5G65360 836661   NP_201339 93
A.thaliana AT5G10400 830904   NP_568228 93
A.thaliana AT1G09200 837440   NP_563838 93
A.thaliana AT5G10390 830903   NP_568227 93
A.thaliana AT3G27360 822357   NP_189372 93
C.elegans his-74 179734   NP_506164 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)