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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. NGFRAP1, nerve growth factor receptor (TNFRSF16) associated protein 1
Sequence ID:NM_014380
NM_206915
NM_206917
Entrez Gene ID:27018
Ensembl ID:ENSG00000166681

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, t-cell, testis, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:Xq22.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 102632108 - 102632999

 Exon Info From UCSC:
NM_014380
NM_206915
NM_206917

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3357965Full LengthBC003190nerve growth factor receptor (TNFRSF16) associated protein 1
5303642IncompleteBC051713nerve growth factor receptor (TNFRSF16) associated protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_996798  NP_996800  NP_055195  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_014380 NP_055195 Q00994 BEX
NM_206915 NP_996798 Q00994 BEX
NM_206917 NP_996800   BEX

Related Sequences

 
mRNAGenPeptSwissProt
M38188 AAA63232 Q00994
M38188 AAA63233 Q14991
AF187064 AAF75129 Q00994
BC003190 AAH03190 Q00994
AY833562 AAX40680 Q00994
HQ447887 ADQ32371  
AK315371 BAG37764 Q00994

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NGFRAP1 NP_055195 M.musculus Ngfrap1 12070 Gene Info NP_033880 93
R.norvegicus Ngfrap1 117089   NP_445853 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)