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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MUC21, mucin 21, cell surface associated
Sequence ID:NM_001010909
Entrez Gene ID:394263
Ensembl ID:ENSG00000204544

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6p21.32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 30951574 - 30956059

NM_001010909 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13123095148430951795
31317573095401330955457
175836563095577630957674

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40026469Full LengthBC107478mucin 21, cell surface associated
40026476Full LengthBC105737mucin 21, cell surface associated
40026480Full LengthBC105735mucin 21, cell surface associated

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001010909 NP_001010909 Q5SSG8  

Related Sequences

 
mRNAGenPeptSwissProt
BC105735 AAI05736 Q5SSG8
BC105736 AAI05737 Q5SSG8
BC105737 AAI05738 Q5SSG8
BC107478 AAI07479 Q5SSG8
AY358415 AAQ88781 Q5SSG8
HM596784 ADJ96647 Q5SSG8
AB242595 BAF92842 Q5SSG8
AK298642 BAG60817 Q5SSG8
AK301645 BAG63124 B4DWR2
AK316363 BAH14734 B7ZAP8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MUC21 NP_001010909 M.musculus Gm9573 672682 Gene Info XP_001479514 41
A.gambiae AgaP_AGAP004771 4576543   XP_001231090 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)