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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RP2, retinitis pigmentosa 2 (X-linked recessive)
Sequence ID:NM_006915
RefSeqGene ID:NG_009107
Entrez Gene ID:6102
Ensembl ID:ENSG00000102218

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
RETINITIS PIGMENTOSA 2 

Cytogenetic Location (from UniGene)

Cytogenetic Location:Xp11.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 46696374 - 46741791

NM_006915 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12914669634646696636
2929574671291046713575
95810724671942246719536
107311584673693946737024
115938274673912046741788

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3871941Full LengthBC053530retinitis pigmentosa 2 (X-linked recessive)
5520795Full LengthBC043348retinitis pigmentosa 2 (X-linked recessive)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_008846  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006915 NP_008846 O75695 TBCC

Related Sequences

 
mRNAGenPeptSwissProt
BC043348 AAH43348 O75695
BC053530 AAH53530 O75695
HQ448604 ADQ33082  
AK312555 BAG35452 B2R6F5
AJ007590 CAA07577 O75695

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RP2 NP_008846 M.musculus Rp2h 19889 Gene Info NP_598430 89
R.norvegicus LOC100361788 100361788   XP_002730230 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)