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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MESP1, mesoderm posterior 1 homolog (mouse)
Sequence ID:NM_018670
Entrez Gene ID:55897
Ensembl ID:ENSG00000166823

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15q26.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 90293097 - 90294093

NM_018670 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
253839029309990293457
38411849029373990294539

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3944350Full LengthBC006219mesoderm posterior 1 homolog (mouse)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_061140  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018670 NP_061140 Q9BRJ9 HLH

Related Sequences

 
mRNAGenPeptSwissProt
BC006219 AAH06219 Q9BRJ9
EU446875 ABZ92404  
AL357533 CAB93425 Q9BRJ9
AL357534 CAB93426 Q9BRJ9
AL357535 CAB93427 Q9NSF0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MESP1 NP_061140 M.musculus Mesp1 17292 Gene Info NP_032614 68
R.norvegicus Mesp1 308766   NP_001101001 67

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)